BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E10SP1|AL425142
(978 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1544 1878 0.0
>3x_Contig1544
Length = 10626
Score = 1878 bits (944), Expect = 0.0
Identities = 966/974 (99%), Gaps = 2/974 (0%)
Strand = Plus / Minus
Query: 1 gatcgccataccgcaatcaccggtaggtttacaacattcaaagtttaccaatctgatacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3812 gatcgccataccgcaatcaccggtaggtttacaacattcaaagtttaccaatctgatacc 3753
Query: 61 acctgaaactcccaagtcaaaaaaccaggagctgtttctttcgccatcgctagagttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3752 acctgaaactcccaagtcaaaaaaccaggagctgtttctttcgccatcgctagagttgca 3693
Query: 121 aagtcctgttcataaacctgttgttgcgactcagaaaccgatacgtgaaatttcgaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3692 aagtcctgttcataaacctgttgttgcgactcagaaaccgatacgtgaaatttcgaataa 3633
Query: 181 ccttaaatcaaggttaaattatgcatacgtcaagatgcaacagaatatgcttcagcattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3632 ccttaaatcaaggttaaattatgcatacgtcaagatgcaacagaatatgcttcagcattc 3573
Query: 241 gaaacgcgggttagatgaatcgattgasgatgctgctcaagtgacaaacgaggtgaaacc 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3572 gaaacgcgggttagatgaatcgattgacgatgctgctcaagtgacaaacgaggtgaaacc 3513
Query: 301 tagttcttatagcaacgttttcgctcaggattcagatacggaactggaaacacttccttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3512 tagttcttatagcaacgttttcgctcaggattcagatacggaactggaaacacttccttc 3453
Query: 361 tgccattaaggaaacgagaaatgcatcaragtccgtattggcacacgatacgatggggtt 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3452 tgccattaaggaaacgagaaatgcatcaaagtccgtattggcacacgatacgatggggtt 3393
Query: 421 garactaaaggrtgatttagaagatttagccggtgagaattctgcgcaggtagcgttctt 480
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3392 gaaactaaaggatgatttagaagatttagccggtgagaattctgcgcaggtagcgttctt 3333
Query: 481 gaaagcgttacaaagtcccaagaaaaaacaaaggtcgttatcctcaacccatccaaagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3332 gaaagcgttacaaagtcccaagaaaaaacaaaggtcgttatcctcaacccatccaaagat 3273
Query: 541 tactagaacatcatcgtcgtcaaattcgcaaccatcagaggtggaagcgatagagacgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3272 tactagaacatcatcgtcgtcaaattcgcaaccatcagaggtggaagcgatagagacgct 3213
Query: 601 tatgtccctttcatcaccacacaagagaagaccttcgggaagctttgacctggcgttgcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3212 tatgtccctttcatcaccacacaagagaagaccttcgggaagctttgacctggcgttgcc 3153
Query: 661 cccaccaacaccccctcccgttaacaataattctacgtctgctgctacgataagtgcttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3152 cccaccaacaccccctcccgttaacaataattctacgtctgctgctacgataagtgcttc 3093
Query: 721 tgatattactactactgattcagatagaactagtaatccaagcgatgatagtgactctaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3092 tgatattactactactgattcagatagaactagtaatccaagcgatgatagtgactctaa 3033
Query: 781 acagggtcctcgcccttccctgggctcgccaaaactgacgaaacccgtcaaactgagttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3032 acagggtcctcgcccttccctgggctcgccaaaactgacgaaacccgtcaaactgagttt 2973
Query: 841 gcattcggaggtgc-aactgacgtggagactgacgtagagtctcaaagcgagttaatgac 899
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2972 gcattcggaggtgcaaactgacgtggagactgacgtagagtctcaaagcgagtaaatgac 2913
Query: 900 aatgcctttttttctctttamccatttcacttcattttggtaat-ccatatctgcctgtt 958
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 2912 aatgcctttttttctctttacccatttcacttcattttggtaatcccatatctgcctgtt 2853
Query: 959 tttaccttaataat 972
||||||||||||||
Sbjct: 2852 tttaccttaataat 2839
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5615
Number of Sequences: 1807
Number of extensions: 5615
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 978
length of database: 10,358,551
effective HSP length: 16
effective length of query: 962
effective length of database: 10,329,639
effective search space: 9937112718
effective search space used: 9937112718
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)